Just spoke with CommissionAcount.com and they are following up to see what can be done. I am sure this was a mistake as they have some pretty good people working there now.
Whenever you change back end software a lot of little things can go wrong that can have a big impact on affiliates. I know when we changed affiliate back end when I was working with Boss we had a mess on our hands 
I am sure some of the veterans here like Dom remember those days :tongue:
please let us know when the situation is resolved!